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CrystalMaker Online Help
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What's New in CrystalMaker 4.0?
Best-Fit Plane Through Points
CrystalMaker
4.0 lets you calculate the optimum orientation of a lattice plane
passing through three-or-more selected atoms. The program uses
a two-stage algorithm, calculating the mean orientation of the
plane and then, if more than three points are involved, performing
a series of least-squares refinement cycles.
To calculate
the best-fit plane through a series of atoms:
- Select the
atoms that you wish the plane to pass through (e.g., by using
the arrow tool).
- Use the Transform
> Fit Plane Through Points command.
- The results
of the fit are printed in the Output Window (if this isn't open,
using the Windows > Output command to display it).
To measure
the distances of atoms from a lattice plane:
- Ensure that
a lattice plane is currently visible (use the Transform > Lattice Plane command to make the plane visible).
- Select the
atoms whose distances you wish to measure with the arrow tool,
or using other selection tools.
- Select the
Transform > Distance from Plane command; lines between the
selected atoms and the lattice plane are drawn, and the perpendicular
distances from the centres of the atoms and the lattice plane
are displayed alongside. (To print the distances in the Output
Window, hold down the option key on your keyboard as you
select the menu command.)
To measure
the angle between two fitted planes:
- If the Output
Window isn't already open, use the Windows > Output command
to make it visible.
- Use the Transform
> Fit Plane Through Points command for each group of points.
Note that the results of the fit, including the orientations
of the planes (their Miller Indices) are printed in the Output
Window.
- Select the
Transform > Calculate Angle command.
- In the dialog,
enter the Miller Indices for the two fitted planes and choose
the "Plane Normal" radio button for each. The included
angle between the two plane normals is now displayed. You can
click the "Record" button to print this information
in the Output Window.
Note: Lattice planes are defined
in terms of their Miller Indices (hkl)
- where a/h, b/k, c/l are the intercepts of the lattice plane
on the crystallographic x, y, and z axes,
respectively (abc are the crystallographic cell parameters).
Main
Menu
© 1999 CrystalMaker Software.
All rights reserved
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